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  1. Home
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  4. > VPN Troubleshooting Case Study: Tunnel UP, Monitoring Failing

VPN Troubleshooting Case Study: Tunnel UP, Monitoring Failing

Intermittent VPN issues are some of the hardest network problems to diagnose. The tunnel shows UP, latency looks normal, packet loss is zero — yet monitoring graphs break and users report inconsistent behavior. Here's how Mafiree found the real cause.

Kishore S September 08, 2026

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Summarize with AI: ChatGPT Google AI Perplexity Claude Grok

The Initial Symptom: Monitoring Graphs Randomly Breaking

The client environment was monitored through a jump server connected over a site-to-site IPsec VPN tunnel. At first glance, everything appeared normal:

  • VPN tunnel status showed UP
  • Routing was functioning correctly
  • SSH access was available
  • No significant packet loss was reported

However, monitoring graphs continuously showed interruptions and missing data points. Mafiree was brought in to investigate why this was happening. Because the VPN appeared healthy, the initial assumption was that the problem existed somewhere else in the monitoring path. That assumption turned out to be wrong.

VPN Troubleshooting: Why Tunnel Status Can Be Misleading

⚠ Key Insight

One of the most common mistakes during VPN troubleshooting is treating tunnel status as proof of tunnel health. A VPN can remain established while still experiencing serious operational problems beneath the surface.

A VPN can remain established while still experiencing:

Hidden Issue Visible Impact Tunnel Status
Rekeying failuresIntermittent data gapsStill UP
Fragmentation problemsLarge packet dropsStill UP
Lifetime mismatchesPeriodic reconnectsStill UP
Phase 2 negotiation failuresSA reset eventsStill UP
Firmware-related bugsConfig auto-revertStill UP

From an application perspective, even brief interruptions can cause monitoring systems to miss data collection windows and create gaps in graphs. The challenge is that these interruptions are often too short to trigger a full tunnel outage alarm.

MTU Validation Across the VPN Tunnel

Because the issue started after VPN-related changes, Mafiree's engineering team considered MTU as an early suspect.

Testing revealed:

  • 1472-byte packets — failed (exceeded VPN payload limit)
  • 1400-byte packets — succeeded

This confirmed that VPN encapsulation overhead was reducing the available payload size. Further analysis of the IPsec configuration showed:

  • AES-256 encryption
  • SHA-256 authentication
  • IKEv2 with PFS enabled

The estimated ESP overhead reduced the usable VPN payload to approximately 1365 bytes. While this finding was important, it did not fully explain the intermittent monitoring interruptions — smaller packets and control-plane traffic continued to function normally.

Network Path Analysis Using MTR

To eliminate routing instability as a potential cause, Mafiree engineers performed a 100-packet MTR analysis. Results showed:

Metric Result Assessment
Packet loss0%Clean
Latency stabilityNormal — no jitterClean
RTT consistencyStable across all hopsClean
Routing changesNone observedClean

At this stage, the network path itself appeared completely healthy. The investigation continued.

SSH Performance Testing and Early Findings

Because monitoring relied on communication through the jump server, SSH responsiveness was tested repeatedly. Ten consecutive SSH sessions completed successfully with connection times consistently below one second. This confirmed:

  • Authentication was functioning correctly
  • Tunnel responsiveness appeared normal
  • No obvious connectivity failures were visible
[Contradiction]

The tunnel appeared healthy, but the service using the tunnel did not. Spot checks passed — but the issue persisted in production.

Discovering a Hidden Timing Pattern

Rather than relying on occasional SSH tests, Mafiree engineers developed a continuous SSH validation script with verbose logging. This approach exposed something that previous testing had completely missed.

Connection failures were not random.

A timing pattern began to emerge. Failures appeared to occur at recurring intervals, suggesting a possible relationship with tunnel lifetime values, rekey operations, or Security Association renegotiation events. When intermittent failures follow a predictable schedule, timing becomes a critical diagnostic clue.

Firewall Firmware Bug: Correlating the Issue

The next step was reviewing the change history, which we examined more closely as the investigation deepened. A timeline comparison revealed that the issue began immediately after the client upgraded firewall firmware and modified VPN settings to align with the new firmware recommendations. This shifted the investigation away from monitoring systems and toward the VPN itself.

The team verified every parameter:

  • Phase 1 and Phase 2 encryption settings
  • Preshared keys and authentication methods
  • Perfect Forward Secrecy configuration
  • Lifetime values on both ends

Everything matched. Yet the issue persisted.

Why Matching VPN Parameters Was Not Enough

At this stage, the tunnel configuration appeared correct on both sides. Even after adjusting lifetime values to match the client's settings, intermittent interruptions continued. This was a critical turning point.

Many troubleshooting efforts stop once configuration values appear identical. The investigation continued here because the observed behavior still did not match the expected outcome — and evidence, not assumptions, drove every next step.

Firewall Logs Revealed the Real Problem

The breakthrough came when we reviewed firewall syslog events rather than relying solely on VPN status pages.

🔍 Root Cause Found

Log analysis showed that VPN-related values were being automatically regenerated and reverted to firmware defaults during operation. Although administrators manually corrected the settings, the firewall periodically altered parameters without any visible indication on the dashboard.

This explained everything:

  • The tunnel remained established
  • Connectivity appeared mostly normal
  • Monitoring graphs continued breaking intermittently

The issue was not a traditional tunnel outage. It was a configuration consistency problem occurring beneath the visible VPN status indicators — invisible to standard monitoring tools.

VPN Troubleshooting Resolution

As a temporary mitigation, Mafiree recommended aligning tunnel settings with the values the firewall repeatedly enforced. This improved stability but did not completely eliminate concerns regarding the underlying platform behavior.

The client later replaced the firewall. Following replacement:

  • Monitoring stabilized immediately
  • VPN interruptions disappeared entirely
  • Graph collection returned to normal
  • No additional tunnel anomalies were observed
Outcome

The evidence strongly indicated that the issue was related to firmware behavior and automatic VPN parameter handling — not routing, monitoring infrastructure, or network performance.

0% Packet loss on MTR analysis — network path was never the issue
1365B Usable VPN payload after AES-256 + SHA-256 ESP overhead
100% Monitoring stability restored after firewall replacement
Mafiree Monitoring

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Lessons Learned from the Investigation

  • 1. A tunnel being UP does not mean it is healthy

    Status indicators only show establishment state. They do not guarantee application stability or configuration consistency.

  • 2. Always correlate problems with recent changes

    The firmware upgrade timeline became one of the most important clues in the entire investigation. Change history is always worth reviewing first.

  • 3. Continuous testing reveals what spot checks miss

    Single SSH tests passed repeatedly. Only continuous scripted testing exposed the hidden recurring failure pattern.

  • 4. Logs are more valuable than dashboards

    VPN dashboards showed a healthy tunnel. Syslogs revealed the firewall was silently reverting its own configuration.

  • 5. Evidence-based troubleshooting matters

    Every hypothesis was tested and either validated or eliminated through evidence — never through assumption. That discipline is what found the real root cause.

FAQ

A VPN tunnel can remain established while experiencing intermittent Security Association resets, rekeying failures, or silent configuration drift caused by firmware behavior. These disruptions are often too brief to trigger a tunnel-down alarm but long enough to break monitoring data collection windows and create graph gaps.
Even when a tunnel shows UP, it can still suffer from rekeying failures causing intermittent data gaps, fragmentation problems dropping larger packets, Phase 1/Phase 2 lifetime mismatches, Phase 2 negotiation failures triggering SA resets, and firmware-related bugs that automatically revert VPN parameters to defaults without any dashboard warning.
IPsec encapsulation adds overhead that reduces usable payload size. In this case, AES-256 with SHA-256 reduced the effective payload to approximately 1365 bytes — meaning 1472-byte packets failed silently while smaller packets and control traffic continued working. This makes the tunnel appear healthy while larger application-layer traffic breaks intermittently
Single SSH tests showed successful connections every time. Only a continuous scripted SSH validation with verbose logging exposed that failures were occurring at predictable recurring intervals — pointing directly to a relationship with tunnel lifetime values and SA renegotiation events. Spot checks will always miss timing-based failures.
Yes, a firmware upgrade changed how the firewall handled VPN parameters. Even after administrators manually corrected the settings, the firewall periodically reverted them back to firmware defaults during operation — with no visible indication on the VPN status dashboard. The behavior was only visible in syslog events.
Configuration values appeared identical on both peers, yet interruptions continued. The reason was that the firewall was overwriting its own configuration automatically after manual corrections. The parameters matched at the moment of review, but drifted again during operation — making this a configuration consistency problem rather than a configuration mismatch.
By shifting from dashboard-based checks to firewall syslog analysis. VPN status pages showed an established tunnel throughout. Syslogs revealed that the firewall was automatically regenerating and reverting VPN-related values to firmware defaults — explaining why the tunnel stayed up while monitoring kept breaking intermittently.

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